identifying soil fertility problems

Module Overview

You should now be well on your way to designing an effective ISFM program. You are familiar with a conceptual and operational framework to implement ISFM and have learned about key principles and concepts of soil fertility. You have also selected and characterized a target area for your efforts. In the last module you have taken a close look at the soils you expect to be dealing with and described their predominant characteristics. This information will provide a good basis for the work you are expected to do in this module - identifying soil fertility problems you will need to deal with in the area you have selected. Identifying problems is an important first step in developing an integrated soil fertility management plan or program. Identification helps you to set priorities for interventions and managing soil fertility.

In order to make the diagnosis as valuable as possible, we will suggest and describe a participatory learning and action research (PLA/R) approach – an iterative cycle of working with farmers and other soil fertility stakeholders to highlight soil fertility problems and take informed action. The framework for this will be the Research DATE described earlier. As you remember, DATE consists of four phases: D(iagnosis), A(ction planning), T(rying things out) and E(valuation). This is a bottom-up approach aiming at strengthening farmers’ capacity in observing and analyzing soil fertility management practices, and taking decisions leading to improvements. The focus of the Research-DATE is on developing answers to site-specific nutrient problems, exploiting opportunities, making the best use of locally available resources and knowledge and decision making in combination with research-based understanding and analysis of the underlying principles.

This module will focus primarily on the D of DATE. In the following lessons you will find descriptions of a range of diagnostic techniques including testing, field observations, mapping and experimentation. The potential contribution of computer-based decision support tools in the diagnostic process will also be highlighted. We will then go on to talk about the role of participatory action planning, research and evaluation in the validation of the diagnosis leading to preliminary recommendations for a limited area.

Lesson 3.1: Diagnosis

The diagnostic phase of the Research-DATE approach aims to get a common understanding of the local landscape, how soil fertility has been transformed over time, and what initiatives farmers have taken in the past. An important aspect of the diagnostic phase is to identify different ‘types’ of farming systems. Village-level and beyond-village level factors that have influenced farmers’ soil fertility strategies should be looked for and analyzed. Such beyond-village level factors typically include infrastructure (roads), market development (inputs, credits), national- and regional-level policies related to land tenure, and access to credits and inputs, the presence of rural development projects, strategies and focus of research and extension institutions etc..

The diagnostic phase should lay down the first ideas and options that can be used in the ‘action-planning’ phase to come later on. A number of learning and decision-support tools (DSTs) can be used in this phase. These tools range from simple rules of thumb (expert knowledge), to complex, crop growth simulation models and the table below gives an overview of decision support tools that can be used during this phase.

While these tools can help to improve understanding of biophysical processes and interactions between soil, climate and animal and plant production systems they mainly deal with nutrient aspects of soil fertility, mostly ignoring physical and biological aspects of ISFM. These non-nutritional effects are especially important when using organic amendments, and in combination with inorganic fertilizer use, they may lead to important gains in fertilizer use efficiency. Also, these diagnostic tools presented tend to give only ‘pictures’ of today’s reality and do not give an idea of the evolution and changes that have occurred in the farming-system(s). Knowing what changes have occurred over a longer time period can give insights into how knowledge is generated, which group of farmers have been most successful in adapting to changing circumstances and why. A comprehensive discussion about analyzing diversity can be accessed in the Supplementary Reading section below.

These tools are also currently weak in terms of capturing the socio-economic aspects of a plot or farm. Farmers may have much more opportunities off-farm for improving livelihoods and this often means that adopting more labor intensive agricultural technologies (as many ISFM options are) is counter productive.

The following lessons will provide additional information on the individual tools.

Lesson 3.1.1: Yield Gap Analysis

Farmers often achieve far less than 50% of the climatic and genetic yield potential for a given sowing date, cultivar choice and site. Figure 1 illustrates factors that define yield gaps at different levels. The potential yield or maximum yield (Ymax) is limited by climate and crop cultivar only, all other factors being optimal. Under irrigated conditions, water is assumed not to be limiting, but under rainfed conditions this assumption is often not true. Ymax is not constant but fluctuates from year to year and with sowing date because of climatic variability. The attainable yield (Ya) is the ‘nutrient-limited’ yield that farmers can achieve with current soil fertility management practices, but with optimal water and crop management. The maximum Ya is often about 80% of Ymax. This is often referred to as the economic yield target (Ytarget) as it is often not economical to close the remaining gap of about 20% of Ymax. In reality actual farmer yields (Yf) are much lower because of a range of constraints to crop growth, including weed pressure, pests and diseases and sub-optimal soil fertility and water management practices.

A first approach to try to understand causes of low yields is to compare average yields in the village with the yields best farmers obtain. Discussions with farmers may give hints about what ‘best farmers’ do differently. This will help to identify the causes of the differences, e.g. weeds, pests or diseases (reducing factors), and will also provide the scope for short term improvement (yield gap 1 = best farmer yield – average yield).

Crop growth simulation models can be applied to determine the attainable yield ceiling under given growth conditions (yield gap 2 = attainable yield ceiling – best farmer yield). This ceiling is limited by nutrients and / or water (the limiting factors). Finally these models can also be used to determine potential yield, i.e. when sufficient water and nutrients are available. It should be realized that these yield gaps give indications about what is agronomically possible, not what would be economically optimal.

Crop growth simulation models may also be helpful to analyze farmer management practices, and identify areas for improvement.

Figure 1: Effect of crop management on potential or maximum yield, attainable yield, best farmer yield and actual average farmer yield.

When analyzing growth reducing and limiting factors, soil fertility will often be one of them. It should be realized, however, that crop growth in farmers’ fields may also suffer from other factors, such as drought or excessive flooding or from incidence of pests, diseases and weeds. Current management practices may prevent the farmer from obtaining better yields, such as choice of variety, plant population, sowing data and the type of fertilizer applied. In the latter case, crop response to fertilizer application may be disappointing due to the fact that the type of fertilizer applied does not match the requirements of the soil, e.g. soils that are low in K will not respond to large doses of N or P.

Supplementary Reading

Lesson 3.1.2: Soil Testing

Soil testing is any chemical or physical measurement that is made on a soil. Soil tests are done to:

A soil test report will give basic information about deficiencies and problems and suggest measures that should be taken to correct problems and specific nutrients that are needed to obtain better yields. Soil tests are considered to be a helpful diagnostic tool but do not provide absolute recommendations. The information they provide must be interpreted using common sense and consider the goals and circumstances of the grower. A key point to remember is that the test only provides information about the fertility level and chemical properties of the soil. Correcting these is only one part of a growers crop management program. There are many other factors that may result in low yields even when nutrients are adequate.

Remember, a soil analysis is only as good as the soil sample taken. If the sample submitted for testing is not representative of the actual status of the field, the results and recommendations will not be very valuable and will probably be misleading. It is therefore important that you know proper procedures to follow when collecting soil samples.

Participants should review the supplementary readings below for more information on soil testing and soil sampling. For some examples of calculating and interpreting N, P, K soil test results in terms of nutrient availability for the crop see the insets below.

See:

Supplementary Reading

Lesson 3.1.3: Plant Tissue Analysis

Plant tissue analysis is a way to measure the nutrients actually taken up by the plant and is another aid in diagnosing crop nutritional problems. Plant analysis is often used to confirm soil test results and can indicate when the cause of the problem is something other than a nutrient deficiency in the soil. For example, if the soil test level is adequate but the plants are deficient, some other factor is limiting the plant's ability to take up available nutrients. Possible explanations include the effects of crop management practices like tillage or pesticide use, pest injury, varietal characteristics and soil physical conditions. Plant nutrient content represents the effects soil nutrient status and all the other factors controlling plant growth.

Just as in soil testing, sample collection is very important. The nutrient concentration in a plant varies with the plant's age and the part of the plant sampled. If plant analyses are to be meaningful, the appropriate plant part must be collected for the age of the plant, and a number of plants must be included to obtain a representative sample. Samples should be taken from the problem area and a nearby "normal" area for comparison. Specific directions on plant sampling generally are available with each sampling kit from the plant analysis laboratory.

For more information on plant tissue analysis and tissue sampling, please read through the supplementary references below.

Supplementary Reading

Lesson 3.1.4: Field Observation

Of course, it is realized that laboratory testing of soil and plant tissue samples are not generally economic or even possible options for most farmers in developing countries. But there are many other tools. Making timely and focused observations in the field has been a valuable way to diagnose problems since the dawn of agriculture and continues to be the most common and valuable way to identify deficiencies and the basis for interventions.

Probably the simplest approach in observation is the transect walk. A grower or agriculturalist can acquire a tremendous amount of information just by walking through a field or production area and noting what looks good and what doesn’t. In a transect walk, the diagnostician walks from one edge of the field or area to the other and makes notes on what is observed including the types of landscape, plants and animals and obvious differences that may be problems that need addressing. Many find it helpful to draw the walk on paper in what is known as a transect map. Such maps show a topographical cross-sections of the territory and are made more useful if notes are made below each portion of the cross-section. See below for an example of a transect map:

A bit more resource intensive but also more valuable is to prepare a more detailed resource map of the entire area in which you are interested. Resource maps are physical maps that identify land use systems and help to graphically illustrate the spatial relationships between different land use systems. Resource maps can be an aid in assessing (potential) conflict between land-use systems and available resources.

Lesson 3.1.5: Diagnostic Keys

Of course, it helps if you can recognize problems as you observe fields and areas. Keys are an excellent tool for helping you do this. Diagnostic keys provide a systematic approach to observing plant and crop systems and help to narrow down the possibilities. In order to use them effectively, however, you will need to be familiar with a few fundamental terms used to describe observed symptoms.

Some of the most common nutrient deficiency symptoms used in keys are listed and defined in the table below:

Term

Definition and comments

Chlorosis

General yellowing of the leaf tissue. A very common deficiency symptom, since many nutrients affect the photosynthesis process directly or indirectly.

Firing

Yellowing, followed by rapid death of lower leaves, moving up the plant and giving the same appearance as if someone touched the bottom of the plants

Interveinal Chlorosis

Yellowing in between leaf veins, but with the veins themselves remaining green. In grasses, this is called striping.

Necrosis

Severe deficiencies result in death of the entire plant or parts of the plant first affected by the deficiency. The plant tissue browns and dies. The tissue which has already died on a still living plant is called necrotic tissue.

Stunting

Many deficiencies result in decreased growth. This can result in shorter height of the affected plants.

Abnormal coloration

Red, purple, brown colors caused by pigments

See our guide to Plant Nutrient-Deficiency Symptoms

I. Effects general on whole plant or localized on older, lower leaves

2

2. Leaves light green. Uniform chlorosis of older leaves, which may die and turn brown. Abnormal production of anthocyanins in stems and leaves. Stems with greatly reduced terminal growth

Nitrogen

2 Leaves dark green. Stunted growth. Abnormal production of anthocyanins resulting in red and purple colors. Death of older leaves. Stems weak and spindly

Phosphorus

II. Effects mostly localized on older, lower leaves

3

3. Older leaves chlorotic, initially interveinal, beginning at tips of leaves. Margins and tips of leaves may turn or cup upward. If severe, all leaves become yellow or white. Older leaves may drop off.

Magnesium

3. Older leaves mottled, with necrosis of leaf tips and margins. Leaves may curl and crinkle. Internodes abnormally short and stems weak, sometimes with brown streaks.

Potassium

III. Effects localized on new leaves

4

4. Terminal bud dies. Tips and margins of youngest leaves necrotic and then buds. Initially young leaves pale green with hooked tips, as well as being deformed

Calcium

4. Terminal bud remains alive

5

5. Leaves light green (never yellow or white), beginning with younger ones. Veins lighter than interveinal areas. Necrotic spots may appear but not common.

Sulfur

5. Leaves chlorotic, beginning with younger ones. Veins remain green, except in case of prolonged, extreme deficiency.

Iron

Source: http://scidiv.bcc.ctc.edu/rkr/Botany110/labs/pdfs/MineralNutrition.pdf

When using the keys you will notice that many of them start by asking where the symptoms are most evident on the plant. This is because different nutrients exhibit different patterns of nutrient mobility.

Mobile nutrients can be translocated from old tissue (bottom of the plant) to new tissue (top of the plant). Nutrients such as potassium and magnesium, which are highly mobile in the plant, show deficiency symptoms in the older leaves. Nutrients such as calcium boron, copper, iron, manganese, molybdenum, and zinc, which have a low mobility in the plant, show deficiency symptoms in the younger leaves. Nutrients such as nitrogen, phosphorus and sulphur, which have a medium mobility in the plant, show deficiency symptoms evenly spread over the plant.

Another important factor to keep in mind when using keys or when observing symptoms is that deficiency symptoms can often be confused with other complex field events, such as high water tables, salt damage, disease, drought, herbicide stress and varietal differences. The appearance of a growth disorder based on visual symptoms does not absolutely mean a nutritional deficiency exists. The observation of a symptom could also be a result of nutrient unavailability or other environmental factors and not to the absence of a particular nutrient in the soil. If more than one deficiency is present, one can be more dominant in its symptoms, obscuring the symptoms of the other element.

For more information on using keys and some examples, we suggest you visit the sites and resources listed below.

Supplementary Reading

Lesson 3.1.6: Photographs

We are sure that you have all heard the old saying, “A picture is worth a thousand words.” Many people find it much more useful to be able to see what a particular deficiency symptom looks like rather than just reading a description. A good source for pictures of common local nutrient deficiency symptoms is your local extension office. Also, as more and more organizations take advantage of the Internet for disseminating information, it is becoming easier to access quality pictures online.

Lesson 3.1.7: History and Record Keeping

Photographs of and keys to nutrient deficiencies are useful in diagnosis, but field experience and knowledge of field history based on local experience is the best diagnostic aid. Good records can provide valuable insights into potential nutrient deficiency problems even when there are no obvious symptoms. Probably more common than acute deficiencies associated with a particular nutrient is the phenomenon of sub-clinical deficiency. Sub-clinical deficiency is said to occur when there is a reduction in yield or yield potential without the visual symptoms of deficiency being seen. Many crops fail to live up to expectations without obvious cause, and a high proportion of these cases can be put down to sub-clinical nutrient deficiencies. Accurate accounting of nutrient removal and replacement, crop production statistics, and soil analysis results will help the producer manage fertilizer applications.

Lesson 3.1.8: Nutrient Flow Analysis

Accurate historical records can be valuable but keeping such records is not all that common, particularly for developing country farmers. One way to get a handle on what is happening to the nutrient status of a field over time is to analyze and map nutrient flows.

Nutrient flow analysis can be used to give insight into the impact of farmer management decisions on soil fertility in his or her farm. Farmers transport material that contains nutrients - be it harvested products, manure, fertilizer or straw that is used to build roofs. Some processes may lead to a loss in nutrients, e.g. burning of straw will result in complete loss of carbon and nitrogen. Estimating nutrient flows is a useful way to find out if farmers’ crop management practices are sustainable, i.e. are outputs of nutrients balanced by a sufficient level of inputs.

To compare flows, there is a need to express them in the same unit, e.g. kg of nitrogen, phosphorus or potassium. This means that one needs to know the concentration of nitrogen in e.g. manure, millet grains and millet straw, etc. and the amount of dry matter (at 0% moisture) that is produced, transformed or transported. Nutrient flow analysis should enable a farmer to answer questions such as: ‘ What is happening to my soil if I do not apply any fertilizer to my rice field, and I sell both rice grain and rice straw?’ It is important to realize that such analyses try to model a complex reality and should, therefore, used with care. Boundaries of the farming system that is analyzed, and boundaries of its subsystems (e.g. rice production system, vegetable production system, animal production system, and household system) should be clearly defined. A wealth of literature is now available demonstrating the nutrient budgeting approach and there are links to some good references in the Supplementary Reading section below.

The nutrient balances include, on one hand, major nutrient inflows from rainfall, organic manure, mineral fertilizers, symbiotic N-fixation and sedimentation; on the other hand, nutrient outflows through harvested produce and losses due to erosion, leaching etc. For a given soil nutrient (usually N, P or K) the equation reads:

Balance = [IN1 + IN2 + IN3+ IN4 + IN5 + IN6] – [OUT1 + OUT2 + OUT3 + OUT4 + OUT5 + OUT6]

where:

IN1 = mineral fertilizers; IN2 = animal manure; IN3 = atmospheric deposition; IN4 = biological nitrogen fixation; IN5 = sedimentation; IN6 = uptake by deep-rooted plants; and OUT1 = harvested production; OUT2 = crop residues; OUT3 = leaching; OUT4 = gaseous losses; OUT5 = soil erosion; OUT6 = losses in deep pit latrines.

Clearly some of these parameters are easier to measure or estimate than others. Nutrient inflows from atmospheric deposition, or losses as gases are invisible and not easy to comprehend by farmers. Often, estimations are combined with actual measurements, which may lead to considerable errors. A simple method to get an idea of nutrient flows associated with a farm or larger area is to develop resource maps.

If nutrient flow analyses are done with farmers it is important to realize that farmers do not think in terms of kg per hectare, but rather in terms of head loads, bags, cans, acres, carrés, etc. and one should as much as possible use these terms as tools of analysis. Such discussions will, therefore, often be more qualitative than quantitative, but can still give important insights, pinpointing e.g. at ‘ leaks’ in the system (e.g. unused animal manure, burning of straw).

Supplementary Reading

Lesson 3.1.9: Resource Flow Mapping

Resource flow mapping consists of making a simplified picture (map) of the farm system and its resource flow pattern, including elements that are crucial in soil fertility management. To make a resource flow map, first draw farm fields and other farm elements such as buildings, grazing areas and compost pits. Then for each field, both present and previous crops are noted and arrows are drawn representing resource flows between fields and other farm elements. Arrows indicate the use of crop products and residues leaving the fields and organic fertilizers produced on-farm, entering the fields. They are also used to show resources leaving and entering the farm such as products sold and mineral fertilizers purchased.

The resulting picture presents an overview of how the farmer actually manages the fertility of his lands, and depicts interactions (or absence of interaction) between farm elements and elements outside the farm. In this process, elements that initially were ‘invisible’ to the farmer are thus made more explicit and ‘visible’. Only the essential elements of the complex farm system are presented within an overall picture that is drawn on a single sheet of paper. This picture permits the analysis of strong and weak points in management, in view of identifying possible improvements.

Below are examples of resource flow maps prepared by farmers.

http://www.nutmon.org/files/6d2413cec969e35b850c104fe40deb9e.pdf

Supplementary Reading

Lesson 3.1.10: Computer-based Diagnostic Tools

No discussion of diagnostic decision support tools would be complete without some reference to the now available computer based tools. Various software models and applications can help to quantify, calculate and visualize nutrient flows (NUTMON), calculate optimal fertilizer doses / ratio’s (NuMaSS, QUEFTS), simulate important aspects of an agricultural system (e.g. a model that simulates the development of soil carbon over a number of years: the Rothamsted Carbon model), and dynamic models that mimic the most important processes of the system of interest (e,g, models that simulate the effects of weather, soil, crop characteristics and crop management on yield, such as DSSAT, COTONS, APSIM and RIDEV)

To learn more about these tools, click on their names below to popup a window containing additional information. Below you will also find a link to an article describing how one of these tools was used in an ISFM program.

Supplemental Reading

Lesson 3.2: Action Planning

Once promising improved soil fertility management options are identified, joint experimentation can be planned with farmers and change agents to test and verify potential interventions. During this phase, farmers should be encouraged to come up with their own ideas. Planning should take place during one or several joint meetings between farmers and change agents where the outcome of the Diagnosis phase is discussed and topics for experimentation of different ISFM options are debated. The results from the learning and decision-support tools developed in the Diagnosis phase can be used to guide the discussions. The outcome of this phase is a timetable for the next growing season(s). This Action plan calendar shows when certain experiments or training sessions will be conducted, when field visits or monitoring tours are planned, and may also include scheduled meetings with local input dealers or credit providers for certain ISFM options. The Action plan calendar will also clearly highlight the division in responsibilities between farmers and change agents.

Lesson 3.3: Trying Things Out

Once the Action plan calendar is developed, ISFM ‘learning plots’ (i.e. fields that are proposed by farmers to be used for joint experimentation and learning) can be established around certain ISFM options. The ISFM learning plots should be followed frequently throughout the season. Field observations and participatory analysis (learning processes instead of comparing just one or two options) are key here. Farmers should be encouraged to make observations and take notes. Ideally farmers keep records of ISFM management practices, i.e. how things were done in practice and keep records of ‘observation indicators’ (e.g. plant height, weed infestation, quality of land preparation, etc.). Such forms need to be developed with farmers, and should be easy to fill in. Visual aids, like drawings and photographs can be useful. Such forms become important learning tools, give a record of cropping history and can be used in farmer discussions.

Farmers should try out new things for themselves. Successful ideas spread rapidly and never more so than when the ideas are developed by farmers themselves. ISFM learning plots will usually focus on a restricted set of management interventions and are farmer-led. Experimentation may deal only with soil fertility related issues, like a certain combination of mineral fertilizer and organic amendments, but may also address other issues that reduce the efficiency of external inputs, such as water and weed management.

ISFM learning plots can be complemented by more detailed analysis of what nutrient is limiting growth. In systems where farmers have the possibility and the means to apply fertilizer, nutrient-omission trials can be installed. Such trials deliberately omit one nutrient to investigate its importance. Through the yield obtained on the plot you get an idea of the supplying capacity of the soil for the nutrient that was omitted. Such trials are very useful, as soil tests are beyond the means of the average farmer and results of soil tests do not always correspond to crop performance, especially for N. The trick is to place the trials at representative sites, on different major soil types, and on sites with different cropping history, such as close to a village, far away etc. Nutrient omission trials are not repeated in one farmers’ field, but each participating farmer is one repetition. Good management of such nutrient omission trials is important, to ensure that nutrients are determining crop growth, and not other factors, such as weeds, diseases, pests, water shortage etc.

Some trials take the form of a fertilizer strip test. In very general terms, this involves alternating strips of a specific fertilization rate or application method with the normal practice. It is important that only one fertilizer variable be changed when comparing two treatments so that valid yield comparisons can be made.

The objective of a strip test is to measure crop yield performances with and without the additive or amendment. Some of the key things to keep in mind when doing such a comparison include:

Supplementary Reading

Lesson 3.4: Evaluation

Evaluation is a continuous process during the cropping cycle. ISFM learning plots should be regularly visited (ideally at least weekly), and compared with farmer practice. Farmer meetings and wrap-up sessions at the end of the season allow discussion of what worked and what didn’t. If monitoring of the experiments was done well (i.e. frequent good observations and sound analysis) recommendation domains can be established for each ISFM option. This will allow certain ISFM options to be fed forward to the DATE-extension cycle. Gradually key villages may become knowledge centers in soil fertility management and may even take a lead role in farmer-to-farmer training.


aglearn.net - Copyright 2004 - CropLife Asia
25F, Rasa Tower, 555 Phaholyothin Rd., Chatuchak, Bangkok, 10900. Thailand.
Telephone: +66 2 937 0487; Fax: +66 2 937 0491
Home - Responsible Pesticide Use - Introduction to IPM - Cotton IPM - Rice IPM - Vegetable IPM - Soil Fertility Management - Contact Us